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中国精品科技期刊2020
何宇星,白高娃,于靖和,等. 鼠李糖乳酪杆菌Z23的益生特性、安全性及全基因组关联分析[J]. 食品工业科技,2025,46(12):184−196. doi: 10.13386/j.issn1002-0306.2024070391.
引用本文: 何宇星,白高娃,于靖和,等. 鼠李糖乳酪杆菌Z23的益生特性、安全性及全基因组关联分析[J]. 食品工业科技,2025,46(12):184−196. doi: 10.13386/j.issn1002-0306.2024070391.
HE Yuxing, BAI Gaowa, YU Jinghe, et al. Probiotic Characterization, Safety and Whole Genome Association Analysis of Lacticaseibacillus rhamnosus Z23[J]. Science and Technology of Food Industry, 2025, 46(12): 184−196. (in Chinese with English abstract). doi: 10.13386/j.issn1002-0306.2024070391.
Citation: HE Yuxing, BAI Gaowa, YU Jinghe, et al. Probiotic Characterization, Safety and Whole Genome Association Analysis of Lacticaseibacillus rhamnosus Z23[J]. Science and Technology of Food Industry, 2025, 46(12): 184−196. (in Chinese with English abstract). doi: 10.13386/j.issn1002-0306.2024070391.

鼠李糖乳酪杆菌Z23的益生特性、安全性及全基因组关联分析

Probiotic Characterization, Safety and Whole Genome Association Analysis of Lacticaseibacillus rhamnosus Z23

  • 摘要: 鼠李糖乳酪杆菌因其优良的益生特性成为近年来深入研究、商业运用最广的菌株之一。因此,该研究以分离于蒙古国Hurunge中的1株鼠李糖乳酪杆菌Z23为研究对象,对菌株Z23进行体外益生特性评价和体内外安全性评价,最后测定其全基因组序列,通过基因型与表型相结合的方法,深入挖掘该菌株与益生特性相关的功能基因。结果表明,菌株Z23在pH2.5酸性环境和0.5%胆盐环境中3 h的存活率分别为85.42%和84.04%;在模拟人工胃液中3 h和模拟人工肠液中4 h的存活率分别为90.19%和85.96%;对二甲苯、乙酸乙酯及正十六烷的疏水性分别为45.08%、19.33%及33.10%;对人结肠癌细胞(Caco-2)3 h的黏附率为5.20%,5 h后菌株Z23的自动聚集率达74.63%,均优于LGG;对4种常见人体致病菌的共聚集率均在36%以上,对7种常见人体致病菌均具有抑制作用。并且,菌株Z23具有较强的抗氧化能力,尤其菌悬液和发酵上清液对羟自由基和超氧阴离子自由基清除率均高于LGG,但对DPPH自由基清除率和总抗氧化能力(T-AOC)低于LGG,而且菌株Z23的抗氧化能力主要集中于菌悬液和发酵上清液。体外安全性试验表明,菌株Z23无溶血活性和氨基酸脱羧酶活性;对克林霉素、四环素、氯霉素、红霉素、氨苄西林5种抗生素敏感;小鼠急性经口毒性试验结果为安全无毒。菌株Z23的全基因组序列大小为3006999 bp,平均GC含量为46.65%,包含1个2960559 bp的染色体和1个46440 bp的质粒,整个基因组含2800个蛋白编码基因(CDSs),共产生2个次级代谢产物合成基因簇(T3PKS和细菌素),且多个与酸耐受性、胆盐耐受性以及抗氧化等相关益生特性基因,并且无可表达的致病性基因。综上所述,菌株Z23是一株具有优良益生特性和安全性的菌株,可为日后应用研究与开发利用提供菌种资源。

     

    Abstract: Lacticaseibacillus rhamnosus is one of the most researched and commercially utilized strains in recent years due to its excellent probiotic properties. In the present study, the in vitro probiotic properties of Lacticaseibacillus rhamnosus Z23, which was isolated from Hurunge, were characterized, and in vitro and in vivo safety evaluations were conducted. Finally, the whole genome sequence of the strain was determined, and the probiotic properties of the strain were explored in depth by combining genotypic and phenotypic methods. The results showed that the survival rates of strain Z23 in a pH2.5 acidic environment and a 0.5% bile salt environment for 3 hours were 85.42% and 84.04%, respectively. The survival rates in simulated artificial gastric fluid for 3 hours and simulated artificial intestinal fluid for 4 hours were 90.19% and 85.96%, respectively. The hydrophobicity to xylene, ethyl acetate, and n-hexadecane was 45.08%, 19.33%, and 33.10%, respectively. The adherence rate to human colon carcinoma cells (Caco-2) after 3 hours was 5.20%, and the auto-aggregation rate of strain Z23 after 5 hours was 74.63%, all of which were better than those of LGG. The co-aggregation rates against four common human pathogenic bacteria were above 36%. Moreover, it exhibited an inhibitory effect on seven common human pathogenic bacteria. Strain Z23 was found to have a strong antioxidant capacity, especially in the bacterial suspension and fermentation supernatant, where higher scavenging rates of hydroxyl radicals and superoxide anion radicals than those of LGG were observed. However, lower scavenging rates of DPPH radicals and total antioxidant capacity (T-AOC) compared to LGG were detected. The antioxidant capacity of strain Z23 was mainly concentrated in the bacterial suspension and the fermentation supernatant. In vitro safety tests showed that no hemolytic activity and no amino acid decarboxylase activity were exhibited by strain Z23. Sensitivity to five antibiotics, including clindamycin, tetracycline, chloramphenicol, erythromycin, and ampicillin was observed. The results of the oral acute toxicity test in mice indicated that it was safe and non-toxic. The whole genome sequence size of strain Z23 was 3006999 bp, with an average GC content of 46.65%, containing a chromosome of 2960559 bp and a plasmid of 46440 bp. The whole genome contained 2800 protein-coding genes (CDSs). A total of two clusters of secondary metabolite synthesis genes (T3PKS and bacteriocin) were identified. It also had several genes related to acid tolerance, bile salt tolerance, and antioxidant properties, and it did not express pathogenic genes. In summary, strain Z23 is a strain with excellent probiotic properties and safety, which can provide strain resources for its future application research, development, and utilization.

     

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